STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BWQ96_09662ATPase ASNA1-like. (132 aa)    
Predicted Functional Partners:
BWQ96_04350
Golgi to ER traffic protein 4-like.
    
 0.706
BWQ96_00802
Ubiquitin receptor RAD23b.
    
 0.706
BWQ96_01602
LMWPc domain-containing protein.
    
 0.635
BWQ96_03417
Sodium/proton antiporter 1.
    
 0.514
BWQ96_03481
Small glutamine-rich tetratricopeptide repeat-containing protein beta.
   
 0.447
BWQ96_00756
Small glutamine-rich tetratricopeptide repeat-containing protein alpha.
   
 0.447
BWQ96_10127
Ubiquitin-like domain-containing protein.
   
 0.420
BWQ96_10061
Syntaxin-32; Belongs to the syntaxin family.
    
 0.406
BWQ96_09372
Ubiquitin domain-containing protein DSK2b.
    
 0.400
BWQ96_07592
Ubiquitin-40S ribosomal protein S27a.
    
 0.400
Your Current Organism:
Gracilariopsis chorda
NCBI taxonomy Id: 448386
Other names: G. chorda, Gracilaria chorda
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.