STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BWQ96_09619Valine--tRNA ligase, chloroplastic/mitochondrial 2. (310 aa)    
Predicted Functional Partners:
BWQ96_09618
Valine--tRNA ligase, chloroplastic/mitochondrial 2.
 
     0.949
BWQ96_08271
Valine--tRNA ligase, chloroplastic/mitochondrial 2.
 
     0.949
BWQ96_10082
Valine--tRNA ligase.
 
     0.948
BWQ96_04764
Valine--tRNA ligase, chloroplastic/mitochondrial 2.
 
     0.945
BWQ96_04765
Valine--tRNA ligase.
 
     0.944
BWQ96_03898
Valine--tRNA ligase.
 
     0.940
BWQ96_01956
Valine--tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 
0.727
BWQ96_02882
Ribosome production factor 2-like.
 
 
    0.662
BWQ96_05403
Glutamate--tRNA ligase, cytoplasmic; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 
 0.638
BWQ96_08231
Tyrosine--tRNA ligase, cytoplasmic.
  
 
 0.588
Your Current Organism:
Gracilariopsis chorda
NCBI taxonomy Id: 448386
Other names: G. chorda, Gracilaria chorda
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.