STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BWQ96_10400ADP-ribosylation factor 2-B; Belongs to the small GTPase superfamily. Arf family. (179 aa)    
Predicted Functional Partners:
BWQ96_07877
Putative serine/threonine-protein kinase.
    
 0.993
BWQ96_01954
Protein lap1.
   
 0.873
BWQ96_02907
Coatomer subunit gamma; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins.
    
 0.836
BWQ96_07006
Beta-glucanase.
   
 0.834
BWQ96_05135
BZIP domain-containing protein.
   
 0.834
BWQ96_09140
AP-2 complex subunit beta.
    
 0.818
BWQ96_07189
Uncharacterized protein.
   
 0.805
BWQ96_00883
ARF guanine-nucleotide exchange factor GNOM.
    
 0.805
BWQ96_10100
Putative ADP-ribosylation factor GTPase-activating protein AGD6.
   
 0.789
BWQ96_03420
AP-1 complex subunit mu; Belongs to the adaptor complexes medium subunit family.
    
 0.785
Your Current Organism:
Gracilariopsis chorda
NCBI taxonomy Id: 448386
Other names: G. chorda, Gracilaria chorda
Server load: low (22%) [HD]