STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BWQ96_09157Cohesin subunit SA-1. (1583 aa)    
Predicted Functional Partners:
BWQ96_05400
Structural maintenance of chromosomes protein.
   
 0.865
BWQ96_09022
Structural maintenance of chromosomes protein.
   
 0.829
BWQ96_06813
Sister chromatid cohesion 1 protein 4.
   
 0.743
BWQ96_04080
Double-strand-break repair protein rad21-like.
   
 0.743
BWQ96_08185
BZIP domain-containing protein.
   
 0.724
BWQ96_00079
Sister chromatid cohesion protein.
   
 0.724
BWQ96_09632
Uncharacterized protein.
   
 0.676
BWQ96_09113
Histone-lysine N-methyltransferase TRX1.
   
 0.676
BWQ96_06983
Uncharacterized protein.
   
 0.676
BWQ96_04425
Uncharacterized protein.
   
 0.676
Your Current Organism:
Gracilariopsis chorda
NCBI taxonomy Id: 448386
Other names: G. chorda, Gracilaria chorda
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.