STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BWQ96_09009Nuclear transcription factor Y subunit C-2. (295 aa)    
Predicted Functional Partners:
BWQ96_06573
Nuclear transcription factor Y subunit B-1.
  
 0.998
BWQ96_04322
Nuclear transcription factor Y subunit alpha.
    
 0.996
BWQ96_03526
Uncharacterized protein.
    
 
 0.873
BWQ96_00065
ISWI chromatin-remodeling complex ATPase CHR17.
    
 
 0.793
BWQ96_07999
DNA polymerase epsilon subunit 2.
     
 0.766
BWQ96_06157
Cyclin-dependent kinase B2-2; Belongs to the protein kinase superfamily.
   
 0.633
BWQ96_03275
Serine/threonine-protein kinase STN7, chloroplastic.
   
 0.633
BWQ96_00710
Cyclin-dependent kinase 1; Belongs to the protein kinase superfamily.
   
 0.633
BWQ96_09630
DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family.
    
 0.519
BWQ96_09631
DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family.
    
 0.519
Your Current Organism:
Gracilariopsis chorda
NCBI taxonomy Id: 448386
Other names: G. chorda, Gracilaria chorda
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