STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BWQ96_09021ATP-binding cassette sub-family D member 4. (611 aa)    
Predicted Functional Partners:
BWQ96_01421
ATP-binding cassette sub-family D member 3.
  
  
 
0.868
BWQ96_09299
ATP-binding cassette sub-family D member 2.
  
 0.679
BWQ96_02471
Peroxisome biogenesis protein 19-1.
    
 0.678
BWQ96_04840
Peroxisomal biogenesis factor 3.
   
 0.619
BWQ96_04253
ABC transporter D family member 2.
  
0.604
BWQ96_09142
DNA repair protein RAD51 homolog; Binds to single and double-stranded DNA and exhibits DNA- dependent ATPase activity. Underwinds duplex DNA. Belongs to the RecA family. RAD51 subfamily.
    
   0.596
BWQ96_03980
DNA repair protein RAD51-like.
    
   0.596
BWQ96_02030
Peroxisomal membrane protein PER10.
    
 0.568
BWQ96_01024
Peroxisomal membrane protein 11-1.
   
 
 0.531
BWQ96_02665
Peroxisomal membrane protein PEX16.
     
 0.527
Your Current Organism:
Gracilariopsis chorda
NCBI taxonomy Id: 448386
Other names: G. chorda, Gracilaria chorda
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