STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BWQ96_08899Phosphoserine phosphatase. (457 aa)    
Predicted Functional Partners:
BWQ96_06166
Histidinol dehydrogenase; Belongs to the histidinol dehydrogenase family.
  
  
 0.956
BWQ96_05403
Glutamate--tRNA ligase, cytoplasmic; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 
 0.838
BWQ96_09445
Uncharacterized protein.
  
 
 0.771
BWQ96_09740
Serine--pyruvate aminotransferase.
   
 0.769
BWQ96_05598
Serine hydroxymethyltransferase 4.
  
 0.756
BWQ96_05053
Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family.
  
 0.756
BWQ96_03804
Serine hydroxymethyltransferase, mitochondrial.
  
 0.756
BWQ96_03193
Imidazole glycerol phosphate synthase hisHF; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The glutaminase domain produces the ammonia necessary for the cyclase domain to produce IGP and AICAR from PRFAR. The ammonia is channeled to the active site of the cyclase domain. Belongs to the HisA/HisF family.
  
  
 0.721
BWQ96_08209
Phosphoserine aminotransferase.
  
 
 0.709
BWQ96_07057
Phosphoserine aminotransferase.
  
 
 0.709
Your Current Organism:
Gracilariopsis chorda
NCBI taxonomy Id: 448386
Other names: G. chorda, Gracilaria chorda
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.