STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BWQ96_08793Protein lin-54-like. (429 aa)    
Predicted Functional Partners:
BWQ96_03057
DIRP domain-containing protein.
   
 0.916
BWQ96_09199
Histone-binding protein RBBP7.
   
 0.810
BWQ96_07178
WD-40 repeat-containing protein MSI4.
   
 0.810
BWQ96_08276
Retinoblastoma-associated protein.
   
 0.804
BWQ96_00175
Transcription factor E2FB.
   
 0.746
BWQ96_08450
Transcription factor Dp-1.
   
 0.642
BWQ96_03198
Transcription factor dpl-1.
   
 0.642
BWQ96_02124
Transcription factor-like protein DPB.
   
 0.642
BWQ96_05614
Fork head transcription factor 1.
    
  0.618
BWQ96_09351
Myb-related protein A.
    
 0.536
Your Current Organism:
Gracilariopsis chorda
NCBI taxonomy Id: 448386
Other names: G. chorda, Gracilaria chorda
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.