STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BWQ96_08693Vascular endothelial zinc finger 1. (430 aa)    
Predicted Functional Partners:
BWQ96_05786
Nitrate reductase [NADH] 2.
    
  0.794
BWQ96_04349
NADH-cytochrome b5 reductase 2.
    
  0.794
BWQ96_00215
Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.
    
  0.794
BWQ96_01340
40S ribosomal protein S14-3; Belongs to the universal ribosomal protein uS11 family.
    
  0.566
BWQ96_08391
Sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1.
    
 0.561
BWQ96_04664
Signal peptide, CUB and EGF-like domain-containing protein 3.
    
 0.561
BWQ96_03640
40S ribosomal protein S20.
    
  0.561
BWQ96_04301
30S ribosomal protein S2.
   
  0.560
BWQ96_03879
Acyl-CoA desaturase.
    
 0.560
BWQ96_05339
30S ribosomal protein S16-1, chloroplastic.
   
  0.558
Your Current Organism:
Gracilariopsis chorda
NCBI taxonomy Id: 448386
Other names: G. chorda, Gracilaria chorda
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.