STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BWQ96_07874MutS protein-like. (968 aa)    
Predicted Functional Partners:
BWQ96_05533
DNA mismatch repair protein MSH5.
  
0.996
BWQ96_02447
DNA mismatch repair protein Mlh1.
 
 0.911
BWQ96_00129
DNA mismatch repair protein MutL.
 
 0.901
BWQ96_04785
Mismatch repair endonuclease PMS2.
 
 0.875
BWQ96_04205
DNA mismatch repair protein MutL.
  
 0.844
BWQ96_08640
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
   
 0.795
BWQ96_00750
Exonuclease 1.
   
 0.773
BWQ96_07037
DNA repair protein UVH3.
   
 0.704
BWQ96_05419
Replication protein A subunit.
   
 0.687
BWQ96_00606
Serine/threonine-protein kinase ATM; Belongs to the PI3/PI4-kinase family.
    
 0.656
Your Current Organism:
Gracilariopsis chorda
NCBI taxonomy Id: 448386
Other names: G. chorda, Gracilaria chorda
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.