STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BWQ96_07779Isoamylase 3, chloroplastic. (742 aa)    
Predicted Functional Partners:
BWQ96_04504
Alpha-1,4 glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.
 
 0.962
BWQ96_08596
4-alpha-glucanotransferase DPE2.
  
 
 0.915
BWQ96_05477
Isoamylase 3, chloroplastic.
  
  
 
0.870
BWQ96_07597
1,4-alpha-glucan-branching enzyme.
     
 
0.850
BWQ96_03427
Ornithine carbamoyltransferase, chloroplastic; Belongs to the aspartate/ornithine carbamoyltransferase superfamily.
  
 
 0.844
BWQ96_05341
Trehalose synthase.
 
 
 0.775
BWQ96_05019
Phosphoglucomutase, chloroplastic; Belongs to the phosphohexose mutase family.
 
 
 0.759
BWQ96_03968
Putative phosphoglucomutase, cytoplasmic 2; Belongs to the phosphohexose mutase family.
 
 
 0.758
BWQ96_09042
Glycogen debranching enzyme.
 
 
 0.722
BWQ96_09758
Putative glycosyltransferase.
   
 0.665
Your Current Organism:
Gracilariopsis chorda
NCBI taxonomy Id: 448386
Other names: G. chorda, Gracilaria chorda
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.