STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BWQ96_07643Uncharacterized protein. (177 aa)    
Predicted Functional Partners:
BWQ96_00151
Cell division control protein 42-like.
   
 0.804
BWQ96_08836
Kinesin-like protein KIF11; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
   
    0.422
BWQ96_09694
ADP-ribosylation factor 1; Belongs to the small GTPase superfamily. Arf family.
   
  0.408
BWQ96_10404
Septum-promoting GTP-binding protein 1.
    
  0.403
BWQ96_10400
ADP-ribosylation factor 2-B; Belongs to the small GTPase superfamily. Arf family.
    
  0.403
BWQ96_09026
Ras-related protein Rab-11A.
    
  0.403
BWQ96_09027
Ras-related protein Rab-11B.
    
  0.403
BWQ96_08982
GPN-loop GTPase 2; Small GTPase required for proper localization of RNA polymerase II and III (RNAPII and RNAPIII). May act at an RNAP assembly step prior to nuclear import; Belongs to the GPN-loop GTPase family.
    
  0.403
BWQ96_07954
GTP-binding protein Rheb-like.
    
  0.403
BWQ96_07467
ADP-ribosylation factor; Belongs to the small GTPase superfamily. Arf family.
    
  0.403
Your Current Organism:
Gracilariopsis chorda
NCBI taxonomy Id: 448386
Other names: G. chorda, Gracilaria chorda
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