STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BWQ96_07422ATP-dependent zinc metalloprotease FTSH 5, mitochondrial. (272 aa)    
Predicted Functional Partners:
BWQ96_06135
Carboxyl-terminal-processing protease.
   
 0.606
BWQ96_01013
Uncharacterized protein.
   
 0.606
BWQ96_01009
Stomatin-like protein 2, mitochondrial.
   
 0.606
BWQ96_08293
Prohibitin.
   
 0.534
BWQ96_00285
Prohibitin.
   
 0.533
BWQ96_02681
Presenilins-associated rhomboid-like protein, mitochondrial.
   
 
 0.519
BWQ96_02854
Hypoxanthine phosphoribosyltransferase; Belongs to the purine/pyrimidine phosphoribosyltransferase family.
  
  
 0.481
BWQ96_01039
Mitochondrial-processing peptidase subunit alpha; Belongs to the peptidase M16 family.
   
 0.475
BWQ96_05314
Uncharacterized protein.
   
 0.469
BWQ96_03125
PHB domain-containing protein.
   
 0.469
Your Current Organism:
Gracilariopsis chorda
NCBI taxonomy Id: 448386
Other names: G. chorda, Gracilaria chorda
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.