STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BWQ96_06978Ribosomal large subunit pseudouridine synthase C. (359 aa)    
Predicted Functional Partners:
BWQ96_06702
Ribosomal silencing factor RsfS.
  
 
 0.706
BWQ96_01175
50S ribosomal protein L21.
   
   0.669
BWQ96_01939
Pseudouridylate synthase 7-like.
    
 
 0.648
BWQ96_02248
rRNA methyltransferase 3, mitochondrial.
  
 
 0.628
BWQ96_04932
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
   
 
 0.624
BWQ96_10111
50S ribosomal protein L13.
  
   0.623
BWQ96_01326
50S ribosomal protein L3; Belongs to the universal ribosomal protein uL3 family.
   
 
 0.617
BWQ96_05697
Putative GTP-binding protein EngB.
   
 
 0.616
BWQ96_05108
50S ribosomal protein L24; Belongs to the universal ribosomal protein uL24 family.
   
   0.603
BWQ96_03931
54S ribosomal protein L51, mitochondrial.
   
   0.599
Your Current Organism:
Gracilariopsis chorda
NCBI taxonomy Id: 448386
Other names: G. chorda, Gracilaria chorda
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.