STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BWQ96_0694230S ribosomal protein S15; Belongs to the universal ribosomal protein uS15 family. (227 aa)    
Predicted Functional Partners:
BWQ96_05339
30S ribosomal protein S16-1, chloroplastic.
  
 0.984
BWQ96_03673
37S ribosomal protein S9, mitochondrial; Belongs to the universal ribosomal protein uS9 family.
  
 0.984
BWQ96_06749
Elongation factor 3.
   
 
 0.983
BWQ96_04301
30S ribosomal protein S2.
  
 0.978
BWQ96_01196
30S ribosomal protein S6.
   
 0.978
BWQ96_00749
30S ribosomal protein S5; Belongs to the universal ribosomal protein uS5 family.
   
 0.977
BWQ96_09833
30S ribosomal protein S18; Belongs to the bacterial ribosomal protein bS18 family.
   
 0.971
BWQ96_07268
Ribosomal protein S14, mitochondrial.
   
 0.971
BWQ96_04961
40S ribosomal protein S3a; Belongs to the eukaryotic ribosomal protein eS1 family.
  
 0.961
BWQ96_02683
50S ribosomal protein L4.
   
 0.960
Your Current Organism:
Gracilariopsis chorda
NCBI taxonomy Id: 448386
Other names: G. chorda, Gracilaria chorda
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.