STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BWQ96_06822Peptidyl-prolyl cis-trans isomerase B. (283 aa)    
Predicted Functional Partners:
BWQ96_02102
GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.
   
 0.832
BWQ96_02203
ADP,ATP carrier protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.
   
 0.816
BWQ96_07731
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
   
 0.782
BWQ96_04728
Uncharacterized protein.
   
 0.728
BWQ96_01326
50S ribosomal protein L3; Belongs to the universal ribosomal protein uL3 family.
   
   0.712
BWQ96_10111
50S ribosomal protein L13.
   
   0.711
BWQ96_03346
Pre-mRNA-processing factor 19-like.
    
 0.706
BWQ96_02084
39S ribosomal protein L11, mitochondrial; Belongs to the universal ribosomal protein uL11 family.
   
   0.706
BWQ96_01175
50S ribosomal protein L21.
  
   0.706
BWQ96_06529
Uncharacterized protein.
    
 0.705
Your Current Organism:
Gracilariopsis chorda
NCBI taxonomy Id: 448386
Other names: G. chorda, Gracilaria chorda
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