STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BWQ96_06695Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (181 aa)    
Predicted Functional Partners:
BWQ96_03624
Ran-specific GTPase-activating protein.
 
 
 0.925
BWQ96_01630
rRNA 2'-O-methyltransferase fibrillarin.
   
 
 0.753
BWQ96_03346
Pre-mRNA-processing factor 19-like.
    
 0.706
BWQ96_08177
Pre-mRNA-splicing factor SYF1.
    
 0.703
BWQ96_00169
Pre-mRNA-processing protein 45.
    
 0.688
BWQ96_00838
Protein TIC 21, chloroplastic.
    
 
 0.654
BWQ96_00971
Crooked neck-like protein 1.
   
  0.647
BWQ96_09943
Protein BUD31-like.
    
  0.639
BWQ96_04728
Uncharacterized protein.
   
 0.635
BWQ96_04597
Pre-mRNA-splicing factor RBM22.
   
  0.635
Your Current Organism:
Gracilariopsis chorda
NCBI taxonomy Id: 448386
Other names: G. chorda, Gracilaria chorda
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