STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BWQ96_06592Uncharacterized protein. (258 aa)    
Predicted Functional Partners:
BWQ96_03346
Pre-mRNA-processing factor 19-like.
    
   0.978
BWQ96_10028
Peptidyl-prolyl cis-trans isomerase CYP57.
    
 0.975
BWQ96_05067
Splicing factor 3B subunit 2.
    
 
 0.975
BWQ96_01647
Pre-mRNA-splicing factor CWC22.
    
 0.973
BWQ96_09943
Protein BUD31-like.
    
 
 0.921
BWQ96_05857
BUD13-like.
    
 
 0.919
BWQ96_01387
Splicing factor 3A subunit 2.
    
 
 0.915
BWQ96_08006
Pre-mRNA-processing factor 17.
    
 0.912
BWQ96_07568
Pre-mRNA-processing factor 17.
    
 0.912
BWQ96_02315
Protein CWC15-like.
   
 
 0.906
Your Current Organism:
Gracilariopsis chorda
NCBI taxonomy Id: 448386
Other names: G. chorda, Gracilaria chorda
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.