STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BWQ96_06337Unconventional prefoldin RPB5 interactor. (529 aa)    
Predicted Functional Partners:
BWQ96_00888
DNA-directed RNA polymerases I, II, and III subunit rpabc1.
    
 
 0.850
BWQ96_08259
Protein UXT-like.
    
 
 0.828
BWQ96_01085
Putative prefoldin subunit 2.
    
 
 0.815
BWQ96_01695
Prefoldin subunit 6.
    
 
 0.786
BWQ96_00465
RuvB-like helicase; Belongs to the RuvB family.
    
 
 0.766
BWQ96_06567
RuvB-like helicase; Belongs to the RuvB family.
    
 
 0.758
BWQ96_06576
RNA polymerase II-associated protein 3.
    
 
 0.695
BWQ96_09174
DNA-directed RNA polymerase III subunit RPC5.
    
   0.570
BWQ96_00464
DNA-directed RNA polymerases I and III subunit RPAC2.
   
   0.568
BWQ96_09143
Prefoldin subunit 5.
    
 
 0.457
Your Current Organism:
Gracilariopsis chorda
NCBI taxonomy Id: 448386
Other names: G. chorda, Gracilaria chorda
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.