STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BWQ96_05831Tubulin-specific chaperone D. (1162 aa)    
Predicted Functional Partners:
BWQ96_00109
Tubulin-specific chaperone E.
    
 0.943
BWQ96_02051
ADP-ribosylation factor-like protein 2; Belongs to the small GTPase superfamily. Arf family.
    
 0.925
BWQ96_01294
Carbonic anhydrase; Reversible hydration of carbon dioxide. Belongs to the beta-class carbonic anhydrase family.
  
  
 0.883
BWQ96_06545
Mitotic spindle assembly checkpoint protein MAD2A.
    
   0.713
BWQ96_01842
Mitotic spindle assembly checkpoint protein MAD1.
   
   0.691
BWQ96_01452
Prefoldin subunit 4; Binds specifically to cytosolic chaperonin (c-CPN) and transfers target proteins to it. Binds to nascent polypeptide chain and promotes folding in an environment in which there are many competing pathways for nonnative proteins; Belongs to the prefoldin subunit beta family.
    
 
 0.688
BWQ96_03049
Tubulin-specific chaperone C.
    
 0.629
BWQ96_07113
Tubulin-folding cofactor B.
    
 0.614
BWQ96_02028
Tubulin-specific chaperone A; Belongs to the TBCA family.
    
 0.599
BWQ96_01600
Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. Belongs to the tubulin family.
    
 0.502
Your Current Organism:
Gracilariopsis chorda
NCBI taxonomy Id: 448386
Other names: G. chorda, Gracilaria chorda
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