STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BWQ96_05442Serine/threonine-protein kinase DCLK3. (747 aa)    
Predicted Functional Partners:
BWQ96_00151
Cell division control protein 42-like.
   
 0.540
BWQ96_04377
Heat stress transcription factor A-1d.
    
 0.482
BWQ96_05752
Phosphatase 2C 12.
   
 0.471
BWQ96_00446
Protein phosphatase 2C and cyclic nucleotide-binding/kinase domain-containing protein.
   
 0.471
BWQ96_02410
Casein kinase I-like; Belongs to the protein kinase superfamily.
  
 
  0.416
BWQ96_05496
Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.
  
 
 
0.414
BWQ96_05307
Mitogen-activated protein kinase 14.
  
 
 
0.407
BWQ96_01285
Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.
  
 
 
0.407
BWQ96_10126
Troponin C, isoform 1.
   
  0.405
BWQ96_03011
Mitogen-activated protein kinase 16; Belongs to the protein kinase superfamily.
  
 
 
0.405
Your Current Organism:
Gracilariopsis chorda
NCBI taxonomy Id: 448386
Other names: G. chorda, Gracilaria chorda
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