STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BWQ96_05352Protein RCC2. (540 aa)    
Predicted Functional Partners:
BWQ96_01954
Protein lap1.
    
 0.850
BWQ96_00251
E3 ubiquitin-protein ligase UPL3.
     
 0.683
BWQ96_00409
Ultraviolet-B receptor UVR8.
 
 
 
0.586
BWQ96_00802
Ubiquitin receptor RAD23b.
    
 0.579
BWQ96_00438
26S proteasome non-ATPase regulatory subunit 4-like.
    
 
 0.561
BWQ96_01481
Phosphatidylinositol 4-kinase gamma 4.
    
 0.556
BWQ96_01578
Polyubiquitin.
    
 0.555
BWQ96_06593
Ubiquitin-conjugating enzyme E2 4; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.550
BWQ96_06111
Ubiquitin-conjugating enzyme E2 E3.
    
 0.550
BWQ96_01560
Ubiquitin-conjugating enzyme E2 pex4; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.550
Your Current Organism:
Gracilariopsis chorda
NCBI taxonomy Id: 448386
Other names: G. chorda, Gracilaria chorda
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.