STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BWQ96_05534IQ domain-containing protein IQM5. (306 aa)    
Predicted Functional Partners:
BWQ96_01954
Protein lap1.
    
 0.855
BWQ96_02346
Histone H2A deubiquitinase MYSM1.
    
 0.670
BWQ96_08267
E3 ubiquitin-protein ligase MIB2.
   
 0.642
BWQ96_07845
Urea amidolyase.
    
 0.553
BWQ96_02863
Allophanate hydrolase.
    
 0.553
BWQ96_00456
Allophanate hydrolase.
    
 0.553
BWQ96_00838
Protein TIC 21, chloroplastic.
    
 0.528
BWQ96_07592
Ubiquitin-40S ribosomal protein S27a.
    
  0.526
BWQ96_00628
General transcription factor 3C polypeptide 3.
    
  0.525
BWQ96_08561
General transcription factor 3C polypeptide 5.
    
  0.523
Your Current Organism:
Gracilariopsis chorda
NCBI taxonomy Id: 448386
Other names: G. chorda, Gracilaria chorda
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.