STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BWQ96_05135BZIP domain-containing protein. (335 aa)    
Predicted Functional Partners:
BWQ96_00151
Cell division control protein 42-like.
   
 0.998
BWQ96_06454
NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial; Belongs to the complex I 30 kDa subunit family.
   
  0.990
BWQ96_01442
PDZ and LIM domain protein 7.
   
 0.990
BWQ96_06554
60S ribosomal protein L6.
   
 0.980
BWQ96_01341
40S ribosomal protein S11; Belongs to the universal ribosomal protein uS17 family.
  
 0.980
BWQ96_05734
Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family.
   
 0.979
BWQ96_03755
60S ribosomal protein L9.
  
 0.979
BWQ96_09702
60S ribosomal protein L23a; Belongs to the universal ribosomal protein uL23 family.
  
 0.978
BWQ96_07825
60S ribosomal protein L21-2.
   
 0.978
BWQ96_05611
60S ribosomal protein L5.
  
 0.978
Your Current Organism:
Gracilariopsis chorda
NCBI taxonomy Id: 448386
Other names: G. chorda, Gracilaria chorda
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.