STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BWQ96_05115Ketol-acid reductoisomerase, chloroplastic; Belongs to the ketol-acid reductoisomerase family. (520 aa)    
Predicted Functional Partners:
BWQ96_06771
Dihydroxy-acid dehydratase.
  
 0.945
BWQ96_04585
Putative 16S rRNA-processing protein RimM.
   
 0.838
BWQ96_02029
Bifunctional protein GlmU.
    
 0.835
BWQ96_02734
6-phosphogluconolactonase; Hydrolysis of 6-phosphogluconolactone to 6-phosphogluconate.
     
 0.828
BWQ96_02693
UDP-glucose 6-dehydrogenase.
  
 
 0.827
BWQ96_01546
UDP-N-acetyl-D-glucosamine 6-dehydrogenase; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.
  
 
 0.827
BWQ96_04504
Alpha-1,4 glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.
     
 0.825
BWQ96_06053
Beta-mannosidase.
    
 0.824
BWQ96_03427
Ornithine carbamoyltransferase, chloroplastic; Belongs to the aspartate/ornithine carbamoyltransferase superfamily.
   
 
 0.819
BWQ96_06872
S-formylglutathione hydrolase; Serine hydrolase involved in the detoxification of formaldehyde.
  
 
 0.785
Your Current Organism:
Gracilariopsis chorda
NCBI taxonomy Id: 448386
Other names: G. chorda, Gracilaria chorda
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