STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BWQ96_04742Vacuolar protein sorting-associated protein 53 A. (836 aa)    
Predicted Functional Partners:
BWQ96_04041
Vacuolar protein sorting-associated protein 54.
   
 0.996
BWQ96_03258
Vacuolar protein sorting-associated protein 52 A.
   
 0.987
BWQ96_08345
Ras-related protein RABH1d.
    
 0.850
BWQ96_00411
Syntaxin-61; Belongs to the syntaxin family.
   
 0.837
BWQ96_02803
Conserved oligomeric Golgi complex subunit 8.
   
 
 0.811
BWQ96_09979
Conserved oligomeric Golgi complex subunit 3.
   
 
 0.805
BWQ96_04808
Conserved oligomeric Golgi complex subunit 4.
   
 
 0.803
BWQ96_02815
Syntaxin-41; Belongs to the syntaxin family.
    
 0.802
BWQ96_05819
Conserved oligomeric Golgi complex subunit 6; Required for normal Golgi function.
     
 0.799
BWQ96_07432
Vesicle transport v-SNARE 13.
    
 0.773
Your Current Organism:
Gracilariopsis chorda
NCBI taxonomy Id: 448386
Other names: G. chorda, Gracilaria chorda
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.