STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BWQ96_04786UDP-glucuronic acid decarboxylase 6. (354 aa)    
Predicted Functional Partners:
BWQ96_02693
UDP-glucose 6-dehydrogenase.
 
 0.984
BWQ96_05538
UDP-glucuronic acid decarboxylase 6.
  
  
 
0.821
BWQ96_01177
40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.
 
 
  0.797
BWQ96_06166
Histidinol dehydrogenase; Belongs to the histidinol dehydrogenase family.
    
  0.786
BWQ96_04961
40S ribosomal protein S3a; Belongs to the eukaryotic ribosomal protein eS1 family.
   
 0.745
BWQ96_02268
40S ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family.
   
  0.739
BWQ96_06555
40S ribosomal protein S23; Belongs to the universal ribosomal protein uS12 family.
   
 0.736
BWQ96_07175
40S ribosomal protein S3-B; Belongs to the universal ribosomal protein uS3 family.
   
 0.726
BWQ96_01341
40S ribosomal protein S11; Belongs to the universal ribosomal protein uS17 family.
   
  0.726
BWQ96_01752
40S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family.
   
  0.722
Your Current Organism:
Gracilariopsis chorda
NCBI taxonomy Id: 448386
Other names: G. chorda, Gracilaria chorda
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.