STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BWQ96_05058Serine/threonine-protein kinase Aurora-3; Belongs to the protein kinase superfamily. (375 aa)    
Predicted Functional Partners:
BWQ96_07724
Putative ubiquitin-conjugating enzyme protein 17.
   
 0.999
BWQ96_03624
Ran-specific GTPase-activating protein.
   
  0.990
BWQ96_05130
Reticulocyte-binding protein 2-like.
   
 0.970
BWQ96_01051
ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.
   
 0.868
BWQ96_01850
Microtubule-associated protein RP/EB family member 1.
   
 0.860
BWQ96_08828
Putative ubiquitin-conjugating enzyme E2 C; Belongs to the ubiquitin-conjugating enzyme family.
   
 0.859
BWQ96_06545
Mitotic spindle assembly checkpoint protein MAD2A.
   
 0.824
BWQ96_04670
Kinetochore protein NDC80-like.
   
 
 0.811
BWQ96_08858
Mitotic spindle checkpoint protein BUBR1.
   
 0.808
BWQ96_07325
Protein FIZZY-RELATED 2.
   
 0.787
Your Current Organism:
Gracilariopsis chorda
NCBI taxonomy Id: 448386
Other names: G. chorda, Gracilaria chorda
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