STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BWQ96_04701Histone acetyltransferase GCN5. (179 aa)    
Predicted Functional Partners:
BWQ96_09981
Uncharacterized protein.
    
 0.828
BWQ96_03265
Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family.
    
 0.750
BWQ96_00923
Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family.
    
 0.750
BWQ96_05830
GFO_IDH_MocA domain-containing protein.
    
 0.644
BWQ96_01242
Inhibitor of growth protein.
    
 0.644
BWQ96_06188
CHD3-type chromatin-remodeling factor PICKLE.
    
 0.500
BWQ96_04308
RAC-beta serine/threonine-protein kinase.
    
  0.466
Your Current Organism:
Gracilariopsis chorda
NCBI taxonomy Id: 448386
Other names: G. chorda, Gracilaria chorda
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.