STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BWQ96_04154Uroporphyrinogen-III C-methyltransferase. (289 aa)    
Predicted Functional Partners:
BWQ96_02147
Porphobilinogen deaminase, chloroplastic.
 
 0.990
BWQ96_01641
Sirohydrochlorin ferrochelatase, chloroplastic.
  
 
 0.876
BWQ96_07917
Delta-aminolevulinic acid dehydratase, chloroplastic; Belongs to the ALAD family.
 
 
 0.850
BWQ96_02862
Uroporphyrinogen decarboxylase; Belongs to the uroporphyrinogen decarboxylase family.
    
 0.816
BWQ96_01014
Uncharacterized protein.
 
 
 0.806
BWQ96_05723
Glutamyl-tRNA reductase; Belongs to the glutamyl-tRNA reductase family.
  
 
 0.776
BWQ96_10551
Ferredoxin--nitrite reductase.
  
 
 0.733
BWQ96_02614
Sulfite reductase [ferredoxin].
  
 
 0.733
BWQ96_08017
Adenylyl-sulfate kinase; Catalyzes the synthesis of activated sulfate.
  
  
 0.732
BWQ96_04325
5'-adenylylsulfate reductase 2, chloroplastic.
  
  
 0.714
Your Current Organism:
Gracilariopsis chorda
NCBI taxonomy Id: 448386
Other names: G. chorda, Gracilaria chorda
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.