STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BWQ96_04038Allene oxide synthase-lipoxygenase protein. (735 aa)    
Predicted Functional Partners:
BWQ96_01954
Protein lap1.
    
 0.643
BWQ96_00606
Serine/threonine-protein kinase ATM; Belongs to the PI3/PI4-kinase family.
    
  0.504
BWQ96_09837
Serpin B8; Belongs to the serpin family.
    
 0.498
BWQ96_09160
Fatty acid 2-hydroxylase; Catalyzes stereospecific hydroxylation of free fatty acids at the C-2 position to produce (R)-2-hydroxy fatty acids, which are building blocks of sphingolipids and glycosphingolipids common in neural tissue and epidermis. Plays an essential role in the synthesis of galactosphingolipids of the myelin sheath. Responsible for the synthesis of sphingolipids and glycosphingolipids involved in the formation of epidermal lamellar bodies critical for skin permeability barrier. Participates in the synthesis of glycosphingolipids and a fraction of type II wax diesters i [...]
      
 0.489
BWQ96_02828
Antizyme inhibitor 2; Belongs to the Orn/Lys/Arg decarboxylase class-II family.
      
 0.489
BWQ96_00429
Tyrosine aminotransferase.
      
 0.489
BWQ96_07592
Ubiquitin-40S ribosomal protein S27a.
    
  0.485
BWQ96_08391
Sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1.
    
 0.478
BWQ96_04664
Signal peptide, CUB and EGF-like domain-containing protein 3.
    
 0.478
BWQ96_07189
Uncharacterized protein.
    
  0.472
Your Current Organism:
Gracilariopsis chorda
NCBI taxonomy Id: 448386
Other names: G. chorda, Gracilaria chorda
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.