STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BWQ96_03847Putative myosin light chain kinase; Belongs to the protein kinase superfamily. (481 aa)    
Predicted Functional Partners:
BWQ96_01954
Protein lap1.
    
 0.834
BWQ96_05029
Ubiquitin-related modifier 1 homolog; Acts as a sulfur carrier required for 2-thiolation of mcm(5)S(2)U at tRNA wobble positions of cytosolic tRNA(Lys), tRNA(Glu) and tRNA(Gln). Serves as sulfur donor in tRNA 2-thiolation reaction by being thiocarboxylated (-COSH) at its C-terminus by the MOCS3/UBA4 homolog. The sulfur is then transferred to tRNA to form 2-thiolation of mcm(5)S(2)U. Also acts as a ubiquitin-like protein (UBL) that is covalently conjugated via an isopeptide bond to lysine residues of target proteins. The thiocarboxylated form serves as substrate for conjugation and oxid [...]
    
 0.828
BWQ96_02226
Serine/threonine-protein kinase HT1.
  
 
  0.681
BWQ96_10126
Troponin C, isoform 1.
    
 0.675
BWQ96_02849
Calmodulin.
    
 0.675
BWQ96_01209
Uncharacterized protein.
 
  
 0.675
BWQ96_00964
Calmodulin; Belongs to the calmodulin family.
    
 0.675
BWQ96_00344
Calmodulin, striated muscle.
    
 0.675
BWQ96_04460
Glutamate receptor ionotropic, NMDA 2C.
   
 0.629
BWQ96_08759
Calcineurin subunit B.
    
 0.615
Your Current Organism:
Gracilariopsis chorda
NCBI taxonomy Id: 448386
Other names: G. chorda, Gracilaria chorda
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