STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BWQ96_03975Biotin synthase. (393 aa)    
Predicted Functional Partners:
BWQ96_00734
Bifunctional dethiobiotin synthetase/7,8-diamino-pelargonic acid aminotransferase, mitochondrial.
 
 
 0.982
BWQ96_10306
Putative 8-amino-7-oxononanoate synthase.
 
 0.948
BWQ96_08372
Acetylornithine aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
 
 
 
 0.948
BWQ96_06309
Ornithine aminotransferase.
 
 
 
 0.906
BWQ96_07743
Uncharacterized protein.
    
 0.848
BWQ96_02309
Biotin--protein ligase 1, chloroplastic.
  
 
 0.763
BWQ96_01084
Biotin--protein ligase.
  
 
 0.763
BWQ96_06666
Carbamoyl-phosphate synthase large chain.
  
 
 0.744
BWQ96_01418
Protein PYR1-3.
  
 
 0.744
BWQ96_00061
Glutamate-1-semialdehyde 2,1-aminomutase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
   
 
 0.738
Your Current Organism:
Gracilariopsis chorda
NCBI taxonomy Id: 448386
Other names: G. chorda, Gracilaria chorda
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.