STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BWQ96_03828GTP-binding protein YPTC1. (250 aa)    
Predicted Functional Partners:
BWQ96_04323
Trafficking protein particle complex subunit; May play a role in vesicular transport from endoplasmic reticulum to Golgi.
    
 0.912
BWQ96_09393
Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.
    
 0.902
BWQ96_07940
Rab GDP dissociation inhibitor; Belongs to the Rab GDI family.
    
 0.895
BWQ96_07495
Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.
    
 0.894
BWQ96_05471
Uncharacterized protein.
    
 0.892
BWQ96_09835
Trafficking protein particle complex subunit 6B.
    
 0.887
BWQ96_09434
Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family. BET3 subfamily.
    
 0.886
BWQ96_02726
Trafficking protein particle complex subunit 2.
    
 0.886
BWQ96_07716
Protein tipD.
    
 0.814
BWQ96_06594
Ras-related protein Rab-13.
  
0.806
Your Current Organism:
Gracilariopsis chorda
NCBI taxonomy Id: 448386
Other names: G. chorda, Gracilaria chorda
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