STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BWQ96_03637Poly(A)-specific ribonuclease PARN. (619 aa)    
Predicted Functional Partners:
BWQ96_03264
mRNA decapping complex subunit 2.
     
 0.644
BWQ96_09014
Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family.
    
 0.499
BWQ96_07072
Far upstream element-binding protein 3.
    
 0.482
BWQ96_04841
Far upstream element-binding protein 1.
    
 0.482
BWQ96_04778
Poly(RC)-binding protein 3.
    
 0.482
BWQ96_08749
Eukaryotic translation initiation factor 4E; Belongs to the eukaryotic initiation factor 4E family.
     
 0.481
BWQ96_05409
Exosome complex component RRP46.
     
 0.475
BWQ96_05412
Exosome complex component RRP46.
     
 0.475
BWQ96_06288
Eukaryotic initiation factor 4A-III; Belongs to the DEAD box helicase family.
    
  0.466
BWQ96_07107
Putative exosome complex component rrp40.
     
 0.463
Your Current Organism:
Gracilariopsis chorda
NCBI taxonomy Id: 448386
Other names: G. chorda, Gracilaria chorda
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.