STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BWQ96_03903Uncharacterized protein. (599 aa)    
Predicted Functional Partners:
BWQ96_01954
Protein lap1.
    
 0.643
BWQ96_00606
Serine/threonine-protein kinase ATM; Belongs to the PI3/PI4-kinase family.
    
  0.504
BWQ96_09837
Serpin B8; Belongs to the serpin family.
    
 0.498
BWQ96_07592
Ubiquitin-40S ribosomal protein S27a.
    
  0.485
BWQ96_08391
Sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1.
    
 0.478
BWQ96_04664
Signal peptide, CUB and EGF-like domain-containing protein 3.
    
 0.478
BWQ96_07189
Uncharacterized protein.
    
  0.472
BWQ96_05078
Uncharacterized protein.
    
  0.441
BWQ96_02580
WD repeat-containing protein 18.
    
  0.441
BWQ96_07781
Transcription initiation factor TFIID subunit 12.
    
  0.437
Your Current Organism:
Gracilariopsis chorda
NCBI taxonomy Id: 448386
Other names: G. chorda, Gracilaria chorda
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.