STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BWQ96_03983TBC1 domain family member 15. (641 aa)    
Predicted Functional Partners:
BWQ96_08467
GTP-binding protein yptV5.
   
 0.902
BWQ96_09971
Mitochondrial fission 1 protein.
    
 0.851
BWQ96_06594
Ras-related protein Rab-13.
 
  
 0.705
BWQ96_05014
Protein DGS1, mitochondrial.
    
 0.705
BWQ96_04804
Chlorophyll a-b binding protein 7, chloroplastic.
     
 0.547
BWQ96_03828
GTP-binding protein YPTC1.
 
   
 0.547
BWQ96_00387
Chlorophyll a-b binding protein 6, chloroplastic.
     
 0.547
BWQ96_01954
Protein lap1.
    
 
 0.503
BWQ96_00038
Rhomboid-like protein 18.
    
 
 0.429
Your Current Organism:
Gracilariopsis chorda
NCBI taxonomy Id: 448386
Other names: G. chorda, Gracilaria chorda
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.