STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BWQ96_03331Thylakoid lumenal 15.0 kDa protein 2, chloroplastic. (227 aa)    
Predicted Functional Partners:
BWQ96_08720
Oxygen-evolving enhancer protein 1, chloroplastic.
  
    0.537
BWQ96_09391
Uncharacterized protein.
  
     0.519
BWQ96_09520
Uncharacterized protein.
  
     0.517
BWQ96_06055
Protein TIC 20-II, chloroplastic.
  
     0.509
BWQ96_00156
Protein TAB2-like.
  
    0.507
BWQ96_01321
PPIase cyclophilin-type domain-containing protein.
  
     0.503
BWQ96_05622
Photosystem II lipoprotein Psb27.
  
    0.491
BWQ96_00250
15-cis-phytoene desaturase.
  
     0.482
BWQ96_05563
Protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB3, chloroplastic.
  
    0.476
BWQ96_04563
Uncharacterized protein.
  
     0.475
Your Current Organism:
Gracilariopsis chorda
NCBI taxonomy Id: 448386
Other names: G. chorda, Gracilaria chorda
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.