BWQ96_03401 protein (Gracilariopsis chorda) - STRING interaction network

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Score

BWQ96_03401

Putative RNA-binding protein RbpE. (631 aa)

Predicted Functional Partners:

BWQ96_06187

0.837

BWQ96_01630

0.815

BWQ96_03092

0.663

BWQ96_07328

0.616

BWQ96_02882

0.586

BWQ96_02431

0.563

BWQ96_02049

0.551

BWQ96_06138

0.543

BWQ96_05399

0.543

BWQ96_04140

0.543

Your Current Organism:

Gracilariopsis chorda

NCBI taxonomy Id: 448386
Other names: G. chorda, Gracilaria chorda

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BWQ96_01630	BWQ96_02431	A0A2V3J1Y9	A0A2V3J077	rRNA 2'-O-methyltransferase fibrillarin.	Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily.	0.775
BWQ96_01630	BWQ96_02882	A0A2V3J1Y9	A0A2V3IZ14	rRNA 2'-O-methyltransferase fibrillarin.	Ribosome production factor 2-like.	0.788
BWQ96_01630	BWQ96_03401	A0A2V3J1Y9	A0A2V3IXK3	rRNA 2'-O-methyltransferase fibrillarin.	Putative RNA-binding protein RbpE.	0.815
BWQ96_01630	BWQ96_04140	A0A2V3J1Y9	A0A2V3IVH6	rRNA 2'-O-methyltransferase fibrillarin.	Mitochondrial GTPase 1.	0.707
BWQ96_01630	BWQ96_05399	A0A2V3J1Y9	A0A2V3IRR4	rRNA 2'-O-methyltransferase fibrillarin.	Guanine nucleotide-binding protein-like NSN1.	0.707
BWQ96_01630	BWQ96_06138	A0A2V3J1Y9	A0A2V3IPS4	rRNA 2'-O-methyltransferase fibrillarin.	H/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs.	0.961
BWQ96_01630	BWQ96_06187	A0A2V3J1Y9	A0A2V3IPU7	rRNA 2'-O-methyltransferase fibrillarin.	Nucleolar protein 56.	0.999
BWQ96_01630	BWQ96_07328	A0A2V3J1Y9	A0A2V3IP95	rRNA 2'-O-methyltransferase fibrillarin.	Putative nucleolar protein 5-1.	0.999
BWQ96_02049	BWQ96_03401	A0A2V3J278	A0A2V3IXK3	Glycine-rich RNA-binding protein 4, mitochondrial.	Putative RNA-binding protein RbpE.	0.551
BWQ96_02431	BWQ96_01630	A0A2V3J077	A0A2V3J1Y9	Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily.	rRNA 2'-O-methyltransferase fibrillarin.	0.775
BWQ96_02431	BWQ96_02882	A0A2V3J077	A0A2V3IZ14	Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily.	Ribosome production factor 2-like.	0.993
BWQ96_02431	BWQ96_03401	A0A2V3J077	A0A2V3IXK3	Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily.	Putative RNA-binding protein RbpE.	0.563
BWQ96_02431	BWQ96_04140	A0A2V3J077	A0A2V3IVH6	Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily.	Mitochondrial GTPase 1.	0.978
BWQ96_02431	BWQ96_05399	A0A2V3J077	A0A2V3IRR4	Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily.	Guanine nucleotide-binding protein-like NSN1.	0.978
BWQ96_02431	BWQ96_06138	A0A2V3J077	A0A2V3IPS4	Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily.	H/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs.	0.613
BWQ96_02431	BWQ96_06187	A0A2V3J077	A0A2V3IPU7	Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily.	Nucleolar protein 56.	0.890
BWQ96_02431	BWQ96_07328	A0A2V3J077	A0A2V3IP95	Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily.	Putative nucleolar protein 5-1.	0.949
BWQ96_02882	BWQ96_01630	A0A2V3IZ14	A0A2V3J1Y9	Ribosome production factor 2-like.	rRNA 2'-O-methyltransferase fibrillarin.	0.788
BWQ96_02882	BWQ96_02431	A0A2V3IZ14	A0A2V3J077	Ribosome production factor 2-like.	Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily.	0.993
BWQ96_02882	BWQ96_03092	A0A2V3IZ14	A0A2V3J192	Ribosome production factor 2-like.	Pre-rRNA-processing protein ESF2.	0.501