STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BWQ96_04345Pre-mRNA 3'-end-processing factor FIP1. (632 aa)    
Predicted Functional Partners:
BWQ96_10125
Cleavage and polyadenylation specificity factor subunit 4.
    
 0.998
BWQ96_09828
Flowering time control protein FY.
   
 0.998
BWQ96_08967
WD repeat-containing protein 82.
   
 0.997
BWQ96_03278
Symplekin.
    
 0.997
BWQ96_05284
Cleavage stimulation factor subunit 77.
   
 0.995
BWQ96_03627
RNA polymerase II subunit A C-terminal domain phosphatase SSU72.
    
 0.994
BWQ96_04391
Cleavage and polyadenylation specificity factor subunit 1.
   
 0.993
BWQ96_01689
Cleavage and polyadenylation specificity factor subunit 3-I.
    
 0.993
BWQ96_00698
E3 ubiquitin ligase PQT3-like.
    
 0.993
BWQ96_06016
Cleavage and polyadenylation specificity factor subunit 2.
    
 0.991
Your Current Organism:
Gracilariopsis chorda
NCBI taxonomy Id: 448386
Other names: G. chorda, Gracilaria chorda
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.