STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BWQ96_03296ATP-dependent Clp protease proteolytic subunit. (200 aa)    
Predicted Functional Partners:
BWQ96_02334
CLP protease regulatory subunit CLPX3, mitochondrial.
 
 0.916
BWQ96_09814
Chaperone protein ClpB.
  
 
 0.723
BWQ96_00015
Chaperone protein ClpB 2; Belongs to the ClpA/ClpB family.
  
 
 0.723
BWQ96_06189
NADH dehydrogenase [ubiquinone] iron-sulfur protein 8-A, mitochondrial.
   
 
 0.493
BWQ96_09688
Chlorophyll a-b binding protein, chloroplastic.
      
 0.489
BWQ96_08627
GrpE protein homolog; Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner; Belongs to the GrpE family.
   
 
 0.486
BWQ96_02281
Protein GrpE; Belongs to the GrpE family.
   
 
 0.486
BWQ96_01897
NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial; Belongs to the complex I 20 kDa subunit family.
   
 
 0.445
BWQ96_05214
Chaperone protein DnaK; Belongs to the heat shock protein 70 family.
   
 
 0.440
BWQ96_05573
50S ribosomal protein L12, chloroplastic.
   
 
 0.432
Your Current Organism:
Gracilariopsis chorda
NCBI taxonomy Id: 448386
Other names: G. chorda, Gracilaria chorda
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.