STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BWQ96_02957Cytochrome b6-f complex iron-sulfur subunit; Component of the cytochrome b6-f complex, which mediates electron transfer between photosystem II (PSII) and photosystem I (PSI), cyclic electron flow around PSI, and state transitions. (219 aa)    
Predicted Functional Partners:
BWQ96_02783
Cytochrome c domain-containing protein.
  
 0.993
BWQ96_06189
NADH dehydrogenase [ubiquinone] iron-sulfur protein 8-A, mitochondrial.
  
 0.992
BWQ96_09039
NADH-ubiquinone oxidoreductase 49 kDa subunit.
   
 0.991
BWQ96_03502
NADH dehydrogenase [ubiquinone] flavoprotein 2, mitochondrial.
   
 0.991
BWQ96_02272
Cytochrome b-c1 complex subunit 7-1.
   
 0.991
BWQ96_07084
Cytochrome c oxidase subunit 5b-1, mitochondrial.
   
 0.990
BWQ96_01558
Putative mitochondrial-processing peptidase subunit beta, mitochondrial; Belongs to the peptidase M16 family.
   
 0.987
BWQ96_06454
NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial; Belongs to the complex I 30 kDa subunit family.
   
 0.986
BWQ96_07124
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5.
   
 0.982
BWQ96_08984
NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial; Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain.
   
 0.981
Your Current Organism:
Gracilariopsis chorda
NCBI taxonomy Id: 448386
Other names: G. chorda, Gracilaria chorda
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