STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BWQ96_03478Periodic tryptophan protein 2-like. (929 aa)    
Predicted Functional Partners:
BWQ96_09924
Putative U3 small nucleolar RNA-associated protein 13.
  
0.999
BWQ96_08682
Nucleolar protein 6.
   
 0.999
BWQ96_04032
U3 small nucleolar RNA-associated protein 10.
   
 0.999
BWQ96_03922
WD repeat-containing protein 36.
   
 0.999
BWQ96_03935
WD repeat-containing protein 3.
  
0.999
BWQ96_03277
U3 small nucleolar RNA-associated protein 18-like.
   
 0.999
BWQ96_02812
U3 small nucleolar RNA-associated protein 6.
   
 0.999
BWQ96_02479
WD repeat-containing protein 75.
   
 0.999
BWQ96_01703
Uncharacterized protein.
   
 0.999
BWQ96_08968
rRNA biogenesis protein RRP5.
   
 
 0.998
Your Current Organism:
Gracilariopsis chorda
NCBI taxonomy Id: 448386
Other names: G. chorda, Gracilaria chorda
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.