STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BWQ96_02764Alpha carbonic anhydrase 1, chloroplastic. (286 aa)    
Predicted Functional Partners:
BWQ96_04272
Bifunctional monodehydroascorbate reductase and carbonic anhydrase nectarin-3.
  
  
 
0.783
BWQ96_05611
60S ribosomal protein L5.
    
 
 0.673
BWQ96_02882
Ribosome production factor 2-like.
   
 
 0.628
BWQ96_05696
60S ribosomal protein L11; Belongs to the universal ribosomal protein uL5 family.
    
 
 0.581
BWQ96_01355
Suppressor of SWI4 1-like.
   
    0.555
BWQ96_04948
Glutamate-rich WD repeat-containing protein 1.
   
  
 0.530
BWQ96_02650
Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family.
   
   0.502
BWQ96_02959
Pumilio-like.
   
    0.501
BWQ96_03478
Periodic tryptophan protein 2-like.
   
    0.497
BWQ96_00070
Nucleolar complex protein 2-like.
   
    0.480
Your Current Organism:
Gracilariopsis chorda
NCBI taxonomy Id: 448386
Other names: G. chorda, Gracilaria chorda
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