STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BWQ96_02411Extracellular exo-alpha-(1->5)-L-arabinofuranosidase ArbA; Belongs to the glycosyl hydrolase 43 family. (362 aa)    
Predicted Functional Partners:
BWQ96_07264
Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway.
  
 0.913
BWQ96_00122
Fructose-bisphosphate aldolase.
  
 
 0.800
BWQ96_07717
Glucose-6-phosphate isomerase; Belongs to the GPI family.
  
 0.779
BWQ96_07138
Glucose-6-phosphate isomerase; Belongs to the GPI family.
  
 0.779
BWQ96_02347
Putative ribose-5-phosphate isomerase 3, chloroplastic.
   
 0.757
BWQ96_05694
6-phosphogluconate dehydrogenase, decarboxylating; Catalyzes the oxidative decarboxylation of 6-phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH.
  
 
 0.745
BWQ96_06278
Ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family.
  
 0.741
BWQ96_01691
Ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family.
  
 0.741
BWQ96_01602
LMWPc domain-containing protein.
  
  0.705
BWQ96_03818
Triosephosphate isomerase.
  
 0.670
Your Current Organism:
Gracilariopsis chorda
NCBI taxonomy Id: 448386
Other names: G. chorda, Gracilaria chorda
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.