STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BWQ96_02064BTB/POZ domain-containing protein 9. (442 aa)    
Predicted Functional Partners:
BWQ96_04060
50S ribosomal protein L19.
   
   0.707
BWQ96_01326
50S ribosomal protein L3; Belongs to the universal ribosomal protein uL3 family.
   
 
 0.707
BWQ96_06816
39S ribosomal protein L46, mitochondrial.
   
 
 0.706
BWQ96_03751
Uncharacterized protein.
   
 
 0.705
BWQ96_01324
50S ribosomal protein L33.
   
   0.704
BWQ96_03931
54S ribosomal protein L51, mitochondrial.
   
   0.703
BWQ96_02683
50S ribosomal protein L4.
   
   0.703
BWQ96_01253
50S ribosomal protein L22; Belongs to the universal ribosomal protein uL22 family.
   
 
 0.700
BWQ96_01129
39S ribosomal protein L47, mitochondrial.
   
 
 0.698
BWQ96_01579
54S ribosomal protein L24, mitochondrial.
   
   0.687
Your Current Organism:
Gracilariopsis chorda
NCBI taxonomy Id: 448386
Other names: G. chorda, Gracilaria chorda
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.