STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BWQ96_02083Arginine decarboxylase. (547 aa)    
Predicted Functional Partners:
BWQ96_02472
Spermidine synthase; Belongs to the spermidine/spermine synthase family.
 
 
    0.762
BWQ96_07149
Spindle pole body component.
    
 0.591
BWQ96_04555
Spindle pole body component.
    
 0.591
BWQ96_01385
Tubulin gamma chain; Tubulin is the major constituent of microtubules. The gamma chain is found at microtubule organizing centers (MTOC) such as the spindle poles or the centrosome.
   
 0.585
BWQ96_08981
Spindle pole body component.
    
 0.572
BWQ96_09202
Spindle pole body component.
    
 0.571
BWQ96_02161
Polycomb group protein FERTILIZATION-INDEPENDENT ENDOSPERM.
    
 0.509
BWQ96_01071
JmjC domain-containing protein.
    
 0.503
BWQ96_08842
Nucleoside diphosphate kinase.
    
  0.486
BWQ96_07756
Nucleoside diphosphate kinase.
    
  0.486
Your Current Organism:
Gracilariopsis chorda
NCBI taxonomy Id: 448386
Other names: G. chorda, Gracilaria chorda
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