STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BWQ96_01755Nuclear factor related to kappa-B-binding protein. (486 aa)    
Predicted Functional Partners:
BWQ96_07103
Actin-related protein 5; Belongs to the actin family.
   
 0.993
BWQ96_00465
RuvB-like helicase; Belongs to the RuvB family.
    
 0.936
BWQ96_08012
Actin-related protein 8; Belongs to the actin family.
   
 0.924
BWQ96_06809
INO80 complex subunit C.
    
 0.882
BWQ96_09058
Ubiquitin carboxyl-terminal hydrolase.
    
 0.869
BWQ96_03870
Putative ubiquitin carboxyl-terminal hydrolase ubh-4.
    
 0.869
BWQ96_06576
RNA polymerase II-associated protein 3.
    
 0.748
BWQ96_02106
High mobility group B protein 13.
    
 0.731
BWQ96_03915
Putative DNA helicase INO80.
   
  0.700
BWQ96_07592
Ubiquitin-40S ribosomal protein S27a.
    
  0.683
Your Current Organism:
Gracilariopsis chorda
NCBI taxonomy Id: 448386
Other names: G. chorda, Gracilaria chorda
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.