STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BWQ96_01697SUMO-conjugating enzyme ubc9; Belongs to the ubiquitin-conjugating enzyme family. (156 aa)    
Predicted Functional Partners:
BWQ96_03624
Ran-specific GTPase-activating protein.
   
 0.998
BWQ96_01913
Small ubiquitin-related modifier 2.
   
 0.952
BWQ96_05689
SUMO-activating enzyme subunit; Belongs to the ubiquitin-activating E1 family.
   
 0.919
BWQ96_08110
SUMO-activating enzyme subunit 1.
  
 0.910
BWQ96_08640
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
   
 0.887
BWQ96_00251
E3 ubiquitin-protein ligase UPL3.
    
 0.881
BWQ96_00057
Asparagine synthetase [glutamine-hydrolyzing] 1.
 
    
 0.855
BWQ96_05707
Small ubiquitin-related modifier 3-like.
   
 0.851
BWQ96_09190
Zinc finger MIZ domain-containing protein 1.
    
 0.841
BWQ96_06333
Zinc finger MIZ domain-containing protein 1.
    
 0.841
Your Current Organism:
Gracilariopsis chorda
NCBI taxonomy Id: 448386
Other names: G. chorda, Gracilaria chorda
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.