STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BWQ96_0175240S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family. (112 aa)    
Predicted Functional Partners:
BWQ96_09016
40S ribosomal protein S28.
   
 0.999
BWQ96_08794
40S ribosomal protein S27-2.
   
 0.999
BWQ96_08279
40S ribosomal protein SA; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits.
   
 0.999
BWQ96_07592
Ubiquitin-40S ribosomal protein S27a.
   
 0.999
BWQ96_07175
40S ribosomal protein S3-B; Belongs to the universal ribosomal protein uS3 family.
   
 0.999
BWQ96_06555
40S ribosomal protein S23; Belongs to the universal ribosomal protein uS12 family.
   
 0.999
BWQ96_07487
Ubiquitin-60S ribosomal protein L40.
   
 0.999
BWQ96_05751
40S ribosomal protein S4; Belongs to the eukaryotic ribosomal protein eS4 family.
   
 0.999
BWQ96_05354
40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family.
   
 0.999
BWQ96_04961
40S ribosomal protein S3a; Belongs to the eukaryotic ribosomal protein eS1 family.
   
 0.999
Your Current Organism:
Gracilariopsis chorda
NCBI taxonomy Id: 448386
Other names: G. chorda, Gracilaria chorda
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.